Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946720.1_cds_XP_016488747.1_79348
CDS Infomation

[gene=LOC107808718] [db_xref=GeneID:107808718] [protein=transcription factor BIM1-like isoform X2] [protein_id=XP_016488747.1] [location=join(80789..80825,80902..80970,82386..82760,83100..83208,83301..83428,83515..83623,83962..84031,84110..84202,84657..85105,85737..85866,85984..86085)] [gbkey=CDS]
Sequence

ATGGAGCTGCCTCAGCCCAGACCGTTTGGAACAGAAGGGAGGAAGACGACGCATGACTTT
CTTTCACTGTATTCACCTGTTCAACAAGATCCAATACCTCCGCAAGCTGGTGGATTCCTA
AAAACACATGACTTCTTGCAACCACTGGAGCAAGCAGAGAAGGCATTAAGGAAGGACGAA
ACCAAAGTTGAGGTTGTGGCTGTAGAGAAGCCTCAAGCACCAGTAGGTCCTCCTTCAGTG
GAGCATATTCTTCCTGGTGGCATAGGCACCTATAGCATTTCTTATTTGCACCAAAGGGTA
CCAAAGCCAGAAGCAAGCTTGTTTGCTGTAGCACAGGCAAGTAGTACCGACAGAAATGAT
GAAAACTCAAACTGCAGTTCTTACACAGGAGGGAGTGGTTTCACACTGTGGGATGAATCT
GCAGTCAAGAAGGGAAAGACAGGGAAGGAGAATTCTGGGGGTGATAGACACGTCCTAAGA
GGTCTGAACACTGGAGGCGGTCAACCTACGACATCATTAGAATGGCAATCACAATCGTCG
TCAAATCACAAACACAACACTACGGCCATAAGTTCGCTCTCATCCGCTCGACAATCATCG
CCTCTTAAGACCCAGAGTTTTGTACACATGATAACATCAGCTAAGAATGCACAAGATGAC
GACGACGATGATGATGAAGATTTTGTGATTAAGAAAGAACCACAGTCGCACCCCAGAGGT
AATTTGTCCGTAAAAGTTGATGGAGAAGGTAATGATAAAAAGCCAAACACCCCACGTTCA
AAGCATTCAGCAACAGAGCAACGGAGAAGAAGCAAGATCAATGACAGATTTCAGATGTTG
AGAGGGATCATCCCTAACAGTGATCAGAAAAGAGATAAAGCATCATTCTTACTGGAGGTT
ATTGAATATATTCATTTTCTACAAGAGAAAGTGCACAAGTATGAGGAATCATACCAAGGC
TGGGAGAATGAACCTTTGAAGTTACCATTGAGCAAGTGCCATAGGACGACTGGAGGTGTA
AGCAATCATCCTCAAGGCACTATCAATACATCAGGTGCTGCACCAACGTATGCAGGAAAG
TTCGATGAGAACATAATGGGGATTTCTTCTACTAATCCTTTTAATGGGCAAAAAGTGGAA
CCAAACATAAGCACCGCAAGTTTAAAAGAAAGCAGTCAGCGGCCTGGTTTAACAAATAAG
GCAACAACAACTTCTATGCACCCAAATACATTTTCATTTTGTGGGGCTAGTAGCACAGCA
GCTCTATATTCATCAAAGCTGACAGCTGATACTGCTAAGTTGGAGTCAAAGTCTCATCCT
CAATTTTCGGTTAGCAGATCACATATGACTGACTATGCTATTCCAAATGCTAATTCAAAA
GGCCAGGATCTGTCTATAGAAAGGGGTACCATCAGCATTTCTAGTGCCTATTCTCAAGGG
TTGTTGAACACCTTGACACTAGCGCTGCAGAATTCTGGAGTAGATTTGTCGCAAGCCAAT
ATATCTGTGCAAATTGATCTTGGGAAGAGAGCAAATGGCATACTACATTCTTCAGCTTCC
ACTGTTAAGGGTGACGATGTTTCCACAAACAAGCAACCAATTCCAAAATCCATAGGTACA
AGCACAAGGGAGGAGTCTGACCGTGCCTTCAAAAGGCTGAAGACTAGTTAA

Peptide Sequence

PEP ID

XP_016488747.1
PEP Infomation

PREDICTED: transcription factor BIM1-like isoform X2 [Nicotiana tabacum]
Sequence

MELPQPRPFGTEGRKTTHDFLSLYSPVQQDPIPPQAGGFLKTHDFLQPLEQAEKALRKDE
TKVEVVAVEKPQAPVGPPSVEHILPGGIGTYSISYLHQRVPKPEASLFAVAQASSTDRND
ENSNCSSYTGGSGFTLWDESAVKKGKTGKENSGGDRHVLRGLNTGGGQPTTSLEWQSQSS
SNHKHNTTAISSLSSARQSSPLKTQSFVHMITSAKNAQDDDDDDDEDFVIKKEPQSHPRG
NLSVKVDGEGNDKKPNTPRSKHSATEQRRRSKINDRFQMLRGIIPNSDQKRDKASFLLEV
IEYIHFLQEKVHKYEESYQGWENEPLKLPLSKCHRTTGGVSNHPQGTINTSGAAPTYAGK
FDENIMGISSTNPFNGQKVEPNISTASLKESSQRPGLTNKATTTSMHPNTFSFCGASSTA
ALYSSKLTADTAKLESKSHPQFSVSRSHMTDYAIPNANSKGQDLSIERGTISISSAYSQG
LLNTLTLALQNSGVDLSQANISVQIDLGKRANGILHSSASTVKGDDVSTNKQPIPKSIGT
STREESDRAFKRLKTS

Transcript Sequence

Gene sequence data has not been registered.